Mp4g08690



Description

Annotation

Database ID Description
SUPERFAMILY SSF90229 CCCH zinc finger
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF55277 GYF domain
ProSiteProfiles PS51360 Plus3 domain profile.
ProSiteProfiles PS50103 Zinc finger C3H1-type profile.
Coils Coil Coil
Pfam PF03126 Plus-3 domain
CDD cd15568 PHD5_NSD
SUPERFAMILY SSF159042 Plus3-like
Gene3D G3DSA:1.10.245.10 SWIB/MDM2 domain
ProSiteProfiles PS51925 SWIB/MDM2 domain profile.
SMART SM00719 rtf1
Gene3D G3DSA:3.30.1490.40 -
SUPERFAMILY SSF47592 SWIB/MDM2 domain
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger)
SMART SM00249 PHD_3
FunFam G3DSA:3.30.40.10:FF:000303 Zinc finger CCCH domain-containing protein 19
ProSiteProfiles PS50829 GYF domain profile.
PANTHER PTHR46695 ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44-RELATED
SMART SM00151 swib_2
SMART SM00444 gyf_5
Pfam PF00642 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
CDD cd00072 GYF
SUPERFAMILY SSF57903 FYVE/PHD zinc finger
Gene3D G3DSA:3.90.70.200 -
Pfam PF02201 SWIB/MDM2 domain
ProSitePatterns PS01359 Zinc finger PHD-type signature.
CDD cd10567 SWIB-MDM2_like
Pfam PF02213 GYF domain
KOG KOG1946 RNA polymerase I transcription factor UAF; [K]
KOG KOG1862 GYF domain containing proteins; N-term missing; C-term missing; [R]
KOG KOG1081 Transcription factor NSD1 and related SET domain proteins; C-term missing; [K]
KOG KOG2402 Paf1/RNA polymerase II complex, RTF1 component (involved in regulation of TATA box-binding protein); N-term missing; C-term missing; [K]
KOG KOG2416 Acinus (induces apoptotic chromatin condensation); C-term missing; [B]
MapolyID Mapoly0157s0010 -

Nomenclature

Gene symbol Product Transcript ID Status
MpC3H16 transcription factor, C3H Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g08690.1 chr4:11076516..11088166 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.