Mp4g12200



Description

Annotation

Database ID Description
SMART SM00487 ultradead3
PANTHER PTHR10799 SNF2/RAD54 HELICASE FAMILY
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM00490 helicmild6
Coils Coil Coil
Gene3D G3DSA:3.40.50.300 -
Pfam PF00271 Helicase conserved C-terminal domain
CDD cd18793 SF2_C_SNF
Pfam PF00176 SNF2-related domain
Gene3D G3DSA:3.40.50.10810 -
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
FunFam G3DSA:3.40.50.10810:FF:000030 ATP-dependent DNA helicase DDM1
KEGG K19001 ATP-dependent DNA helicase
KOG KOG0385 Chromatin remodeling complex WSTF-ISWI, small subunit; C-term missing; [K]
MapolyID Mapoly0011s0202 -

Nomenclature

Gene symbol Product Transcript ID Status
MpDDM1 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g12200.1 chr4:15288371..15296370 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.