Mp4g20290



Description

Annotation

Database ID Description
ProSiteProfiles PS51375 Pentatricopeptide (PPR) repeat profile.
Pfam PF01535 PPR repeat
Gene3D G3DSA:1.25.40.10 Tetratricopeptide repeat domain
Pfam PF12854 PPR repeat
SUPERFAMILY SSF81901 HCP-like
Pfam PF13041 PPR repeat family
PANTHER PTHR47932 ATPASE EXPRESSION PROTEIN 3
MobiDBLite mobidb-lite consensus disorder prediction
NCBIfam TIGR00756 pentatricopeptide repeat
Coils Coil Coil
Pfam PF07721 Tetratricopeptide repeat
KOG KOG4422 Uncharacterized conserved protein; N-term missing; C-term missing; [S]
KOG KOG4422 Uncharacterized conserved protein; N-term missing; C-term missing; [S]
KOG KOG4422 Uncharacterized conserved protein; N-term missing; [S]
KOG KOG4318 Bicoid mRNA stability factor; C-term missing; [A]
MapolyID Mapoly0116s0031 -

Nomenclature

Gene symbol Product Transcript ID Status
MpPPR_53 Pentatricopeptide repeat proteins Published

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g20290.1 chr4:27297156..27301008 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g20290.2 chr4:27297236..27301008 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.