Mp4g21990



Description

Annotation

Database ID Description
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor
PANTHER PTHR45752 LEUCINE-RICH REPEAT-CONTAINING
SMART SM00369 LRR_typ_2
SUPERFAMILY SSF52058 L domain-like
Gene3D G3DSA:3.40.50.300 -
Gene3D G3DSA:3.40.50.1820 alpha/beta hydrolase
Gene3D G3DSA:1.10.8.430 -
Pfam PF13306 BspA type Leucine rich repeat region (6 copies)
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
PRINTS PR00364 Disease resistance protein signature
Pfam PF00931 NB-ARC domain
SUPERFAMILY SSF53474 alpha/beta-Hydrolases
KEGG K23504 protein SERAC1
KOG KOG0472 Leucine-rich repeat protein; [S]
KOG KOG2029 Uncharacterized conserved protein; N-term missing; [S]
KOG KOG4237 Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats; N-term missing; C-term missing; [WT]
MapolyID Mapoly0893s0001 -

Nomenclature

Gene symbol Product Transcript ID Status
MpNBS-LRR12 NBS genes Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g21990.1 chr4:29122700..29130120 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.