Mp5g00440



Description

Annotation

Database ID Description
ProSiteProfiles PS51375 Pentatricopeptide (PPR) repeat profile.
Gene3D G3DSA:1.25.40.10 Tetratricopeptide repeat domain
PANTHER PTHR47447 OS03G0856100 PROTEIN
Pfam PF01535 PPR repeat
Pfam PF13041 PPR repeat family
Pfam PF17177 Pentacotripeptide-repeat region of PRORP
SUPERFAMILY SSF48452 TPR-like
NCBIfam TIGR00756 pentatricopeptide repeat
Pfam PF13812 Pentatricopeptide repeat domain
KOG KOG4422 Uncharacterized conserved protein; N-term missing; C-term missing; [S]
MapolyID Mapoly0078s0043 -

Nomenclature

Gene symbol Product Transcript ID Status
MpPPR_48 Pentatricopeptide repeat proteins Published

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g00440.1 chr5:771857..777711 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g00440.2 chr5:772440..777711 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.