Mp5g06080



Description

Annotation

Database ID Description
PANTHER PTHR12480 ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF51197 Clavaminate synthase-like
Gene3D G3DSA:2.60.120.650 Cupin
Pfam PF12937 F-box-like
SMART SM00558 cupin_9
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
CDD cd09917 F-box_SF
SUPERFAMILY SSF81383 F-box domain
ProSiteProfiles PS51184 JmjC domain profile.
Gene3D G3DSA:1.20.1280.50 -
Pfam PF13621 Cupin-like domain
FunFam G3DSA:2.60.120.650:FF:000045 F-box protein At1g78280
KEGG K11323 histone arginine demethylase JMJD6 [EC:1.14.11.-]
KOG KOG2130 Phosphatidylserine-specific receptor PtdSerR, contains JmjC domain; [BT]
MapolyID Mapoly0027s0020 -

Nomenclature

Gene symbol Product Transcript ID Status
MpHDM5 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g06080.1 chr5:8071100..8079332 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.