Mp5g06550



Description

Annotation

Database ID Description
Gene3D G3DSA:1.20.58.2010 PRONE domain, subdomain 1
Pfam PF03759 PRONE (Plant-specific Rop nucleotide exchanger)
MobiDBLite mobidb-lite consensus disorder prediction
FunFam G3DSA:1.20.58.2010:FF:000003 Rop guanine nucleotide exchange factor 14
ProSiteProfiles PS51334 PRONE domain profile.
PANTHER PTHR33101 ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1
FunFam G3DSA:1.20.58.2010:FF:000001 Rop guanine nucleotide exchange factor 14
KOG KOG4020 Protein DRE2, required for cell viability; N-term missing; C-term missing; [S]
MapolyID Mapoly0171s0028 -

Nomenclature

Gene symbol Product Transcript ID Status
MpKAR RopGEF Published
MpKARAPPO PRONE-type guanine nucleotide exchange factor for ROP GTPase, gemmae cup Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g06550.1 chr5:8701700..8707320 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g06550.2 chr5:8700389..8707285 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.