Mp5g08550



Description

Annotation

Database ID Description
PIRSF PIRSF000641 SRK
SUPERFAMILY SSF51110 alpha-D-mannose-specific plant lectins
ProSiteProfiles PS50026 EGF-like domain profile.
SMART SM00108 blect_4
FunFam G3DSA:1.10.510.10:FF:000248 S-receptor-like kinase 5
ProSiteProfiles PS50011 Protein kinase domain profile.
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
Gene3D G3DSA:3.50.4.10 Hepatocyte Growth Factor
Gene3D G3DSA:2.90.10.10 -
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
CDD cd01098 PAN_AP_plant
Pfam PF00069 Protein kinase domain
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
SMART SM00220 serkin_6
SMART SM00473 ntp_6
ProSiteProfiles PS50927 Bulb-type lectin domain profile.
ProSitePatterns PS00107 Protein kinases ATP-binding region signature.
ProSiteProfiles PS50948 PAN/Apple domain profile.
CDD cd14066 STKc_IRAK
CDD cd00028 B_lectin
Pfam PF01453 D-mannose binding lectin
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
CDD cd00054 EGF_CA
Pfam PF08276 PAN-like domain
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR47974 OS07G0415500 PROTEIN
FunFam G3DSA:3.30.200.20:FF:000178 serine/threonine-protein kinase PBS1-like
SUPERFAMILY SSF57414 Hairpin loop containing domain-like
KOG KOG1187 Serine/threonine protein kinase; [T]
MapolyID Mapoly0086s0060 -

Nomenclature

Gene symbol Product Transcript ID Status
MpRLK-Pelle_SD-2b4 Receptor-like Kinase (RLK) Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g08550.1 chr5:11561197..11565979 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.