Mp5g10240



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF17800 Nucleoplasmin-like domain
ProSitePatterns PS00028 Zinc finger C2H2 type domain signature.
Gene3D G3DSA:2.60.120.340 Nucleoplasmin core domain
FunFam G3DSA:2.60.120.340:FF:000004 Histone deacetylase HDT1
ProSiteProfiles PS50157 Zinc finger C2H2 type domain profile.
KOG KOG1467 Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2); C-term missing; [J]
MapolyID Mapoly0048s0048 -

Nomenclature

Gene symbol Product Transcript ID Status
MpHDAC11 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g10240.1 chr5:13950643..13955715 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g10240.2 chr5:13950643..13955715 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g10240.3 chr5:13950643..13955715 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g10240.4 chr5:13950643..13955715 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g10240.5 chr5:13950683..13955714 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.