Mp5g13160



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:1.10.10.60 -
SUPERFAMILY SSF47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
CDD cd00086 homeodomain
SUPERFAMILY SSF46689 Homeodomain-like
SMART SM00389 HOX_1
PANTHER PTHR33400 ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED
KOG KOG0199 ACK and related non-receptor tyrosine kinases; N-term missing; [T]
KOG KOG2546 Abl interactor ABI-1, contains SH3 domain; N-term missing; C-term missing; [TZ]
KOG KOG0783 Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains; N-term missing; [S]
MapolyID Mapoly0032s0010 -

Nomenclature

Gene symbol Product Transcript ID Status
MpHD10 transcription factor, HD, homeodomain protein Published
MpLD transcription factor, HD, homeodomain protein Published

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g13160.1 chr5:17368235..17384124 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g13160.2 chr5:17362911..17384124 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g13160.3 chr5:17362973..17384124 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.