Mp5g16720



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
CDD cd04015 C2_plant_PLD
SMART SM00239 C2_3c
Pfam PF12357 Phospholipase D C terminal
PIRSF PIRSF036470 PLD_plant
Gene3D G3DSA:3.30.870.10 Endonuclease Chain A
Pfam PF00614 Phospholipase D Active site motif
ProSiteProfiles PS50035 Phospholipase D phosphodiesterase active site profile.
ProSiteProfiles PS50004 C2 domain profile.
Gene3D G3DSA:2.60.40.150 C2 domain
SUPERFAMILY SSF56024 Phospholipase D/nuclease
PANTHER PTHR18896 PHOSPHOLIPASE D
Pfam PF00168 C2 domain
SUPERFAMILY SSF49562 C2 domain (Calcium/lipid-binding domain, CaLB)
FunFam G3DSA:3.30.870.10:FF:000025 Phospholipase D delta
SMART SM00155 pld_4
KEGG K01115 phospholipase D1/2 [EC:3.1.4.4]
KOG KOG1329 Phospholipase D1; [I]
MapolyID Mapoly0117s0034 -

Nomenclature

Gene symbol Product Transcript ID Status
MpPLD5 lipid turnover protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g16720.1 chr5:20662498..20669434 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g16720.2 chr5:20662498..20669434 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g16720.3 chr5:20662775..20669409 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.