Mp5g23860



Description

Annotation

Database ID Description
ProSitePatterns PS00518 Zinc finger RING-type signature.
Coils Coil Coil
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF90229 CCCH zinc finger
SUPERFAMILY SSF57850 RING/U-box
Gene3D G3DSA:1.20.120.1750 -
Gene3D G3DSA:3.30.420.10 -
SUPERFAMILY SSF53098 Ribonuclease H-like
CDD cd22584 Rcat_RBR_unk
Pfam PF13456 Reverse transcriptase-like
Pfam PF01485 IBR domain, a half RING-finger domain
SMART SM00184 ring_2
PANTHER PTHR11685 RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING
CDD cd22582 BRcat_RBR_unk
Pfam PF00097 Zinc finger, C3HC4 type (RING finger)
FunFam G3DSA:1.20.120.1750:FF:000019 RBR-type E3 ubiquitin transferase
ProSiteProfiles PS51873 TRIAD supradomain profile.
Pfam PF00642 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Gene3D G3DSA:4.10.1000.10 -
FunFam G3DSA:3.30.40.10:FF:000230 RBR-type E3 ubiquitin transferase
ProSiteProfiles PS50103 Zinc finger C3H1-type profile.
ProSiteProfiles PS50089 Zinc finger RING-type profile.
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger)
SMART SM00356 c3hfinal6
SMART SM00647 ibrneu5
FunFam G3DSA:4.10.1000.10:FF:000001 zinc finger CCCH domain-containing protein 15-like
KEGG K11975 E3 ubiquitin-protein ligase RNF144 [EC:2.3.2.31]
KOG KOG1812 Predicted E3 ubiquitin ligase; [O]
KOG KOG1677 CCCH-type Zn-finger protein; N-term missing; C-term missing; [R]
MapolyID Mapoly0010s0070 -

Nomenclature

Gene symbol Product Transcript ID Status
MpC3H21 transcription factor, C3H Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g23860.1 chr5:30203689..30208967 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.