Mp6g03160



Description

Annotation

Database ID Description
ProSiteProfiles PS50016 Zinc finger PHD-type profile.
SMART SM00249 PHD_3
FunFam G3DSA:2.30.30.490:FF:000019 Chromatin remodeling protein EBS
Pfam PF00628 PHD-finger
Gene3D G3DSA:2.30.30.490 -
CDD cd04714 BAH_BAHCC1
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger)
PANTHER PTHR46364 OS08G0421900 PROTEIN
SMART SM00439 BAH_4
SUPERFAMILY SSF57903 FYVE/PHD zinc finger
ProSiteProfiles PS51038 BAH domain profile.
ProSitePatterns PS01359 Zinc finger PHD-type signature.
Pfam PF01426 BAH domain
KEGG K25868 chromatin remodeling protein
KOG KOG1886 BAH domain proteins; C-term missing; [K]
KOG KOG1632 Uncharacterized PHD Zn-finger protein; C-term missing; [R]
MapolyID Mapoly0035s0096 -

Nomenclature

Gene symbol Product Transcript ID Status
MpHAT13 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp6g03160.1 chr6:4301652..4315084 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp6g03160.2 chr6:4301748..4315084 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp6g03160.3 chr6:4301652..4315084 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.