Mp6g15200



Description

Annotation

Database ID Description
ProSiteProfiles PS50103 Zinc finger C3H1-type profile.
MobiDBLite mobidb-lite consensus disorder prediction
CDD cd21134 YTH
Pfam PF04146 YT521-B-like domain
Gene3D G3DSA:3.10.590.10 ph1033 like domains
ProSiteProfiles PS50882 YTH domain profile.
FunFam G3DSA:4.10.1000.10:FF:000017 Cleavage and polyadenylation specificity factor 30 kDa subunit
SMART SM00356 c3hfinal6
Gene3D G3DSA:4.10.1000.10 -
PANTHER PTHR12357 YTH YT521-B HOMOLOGY DOMAIN-CONTAINING
SUPERFAMILY SSF90229 CCCH zinc finger
KEGG K14404 cleavage and polyadenylation specificity factor subunit 4
KOG KOG1902 Putative signal transduction protein involved in RNA splicing; [TA]
KOG KOG1040 Polyadenylation factor I complex, subunit, Yth1 (CPSF subunit); C-term missing; [A]
MapolyID Mapoly0056s0030 -

Nomenclature

Gene symbol Product Transcript ID Status
MpC3H24 transcription factor, C3H Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp6g15200.1 chr6:19440810..19445740 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.