Mp6g18490



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF02985 HEAT repeat
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
Coils Coil Coil
Pfam PF12054 Domain of unknown function (DUF3535)
Gene3D G3DSA:1.25.10.10 -
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Gene3D G3DSA:3.40.50.300 -
CDD cd17999 DEXHc_Mot1
SMART SM00490 helicmild6
SUPERFAMILY SSF48371 ARM repeat
ProSiteProfiles PS50077 HEAT repeat profile.
Pfam PF00176 SNF2-related domain
FunFam G3DSA:3.40.50.300:FF:000428 TATA-binding protein-associated factor 172
Gene3D G3DSA:3.40.50.10810 -
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
Pfam PF00271 Helicase conserved C-terminal domain
SMART SM00487 ultradead3
CDD cd18793 SF2_C_SNF
PANTHER PTHR36498 TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172
FunFam G3DSA:3.40.50.10810:FF:000009 B-TFIID TATA-box-binding protein-associated factor 1
KEGG K15192 TATA-binding protein-associated factor [EC:5.6.2.-]
KOG KOG0392 SNF2 family DNA-dependent ATPase domain-containing protein; [K]
MapolyID Mapoly0038s0059 -

Nomenclature

Gene symbol Product Transcript ID Status
Mpsnf1.19 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp6g18490.1 chr6:24667325..24684412 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp6g18490.2 chr6:24667325..24684397 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.