Mp6g21470



Description

Annotation

Database ID Description
SUPERFAMILY SSF47459 HLH, helix-loop-helix DNA-binding domain
Gene3D G3DSA:4.10.280.10 -
PANTHER PTHR45914 TRANSCRIPTION FACTOR HEC3-RELATED
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50888 Myc-type, basic helix-loop-helix (bHLH) domain profile.
SMART SM00353 finulus
CDD cd11454 bHLH_AtIND_like
Pfam PF00010 Helix-loop-helix DNA-binding domain
FunFam G3DSA:4.10.280.10:FF:000046 Transcription factor bHLH83
KOG KOG3663 Nuclear factor I; N-term missing; [K]
KOG KOG0129 Predicted RNA-binding protein (RRM superfamily); C-term missing; [J]
MapolyID Mapoly0091s0008 -

Nomenclature

Gene symbol Product Transcript ID Status
MpBHLH28 transcription factor, bHLH Published

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp6g21470.1 chr6:27789611..27794378 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp6g21470.2 chr6:27789611..27794378 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.