Mp7g09710



Description

Annotation

Database ID Description
CDD cd00086 homeodomain
ProSiteProfiles PS50848 START domain profile.
CDD cd08875 START_ArGLABRA2_like
ProSitePatterns PS00027 'Homeobox' domain signature.
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:1.10.10.60 -
Gene3D G3DSA:3.30.530.20 -
SMART SM00234 START_1
SMART SM00389 HOX_1
SUPERFAMILY SSF46689 Homeodomain-like
Coils Coil Coil
FunFam G3DSA:1.10.10.60:FF:000229 Homeobox-leucine zipper protein HDG1
FunFam G3DSA:3.30.530.20:FF:000026 Homeobox-leucine zipper protein GLABRA 2
PRINTS PR00031 Lambda-repressor HTH signature
PANTHER PTHR45654 HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1
SUPERFAMILY SSF55961 Bet v1-like
ProSiteProfiles PS50071 'Homeobox' domain profile.
Pfam PF00046 Homeodomain
Pfam PF01852 START domain
KEGG K09338 homeobox-leucine zipper protein
KOG KOG0483 Transcription factor HEX, contains HOX and HALZ domains; C-term missing; [K]
MapolyID Mapoly0156s0012 -

Nomenclature

Gene symbol Product Transcript ID Status
MpC4HDZ transcription factor, HD, homeodomain protein Published
MpHD18 transcription factor, HD, homeodomain protein Published

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp7g09710.1 chr7:12729542..12734938 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.