Mp7g14210



Description

Annotation

Database ID Description
FunFam G3DSA:1.10.510.10:FF:000016 Somatic embryogenesis receptor-like kinase 1
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
Pfam PF00560 Leucine Rich Repeat
PANTHER PTHR47988 SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1
Pfam PF00069 Protein kinase domain
SMART SM00369 LRR_typ_2
SUPERFAMILY SSF52058 L domain-like
SMART SM00220 serkin_6
PRINTS PR00019 Leucine-rich repeat signature
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
Pfam PF13855 Leucine rich repeat
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
ProSitePatterns PS00107 Protein kinases ATP-binding region signature.
FunFam G3DSA:3.30.200.20:FF:000015 Somatic embryogenesis receptor kinase 1
FunFam G3DSA:3.80.10.10:FF:000275 Leucine-rich repeat receptor-like protein kinase
Pfam PF08263 Leucine rich repeat N-terminal domain
ProSiteProfiles PS50011 Protein kinase domain profile.
KOG KOG1187 Serine/threonine protein kinase; [T]
KOG KOG0618 Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP); C-term missing; [T]
MapolyID Mapoly0009s0106 -

Nomenclature

Gene symbol Product Transcript ID Status
MpCIK1 LRR-RLK, peptide receptor Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp7g14210.1 chr7:17935902..17941965 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp7g14210.2 chr7:17936407..17941583 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.