Mp7g15670



Description

Annotation

Database ID Description
SMART SM00717 sant
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:1.20.120.850 -
SMART SM00490 helicmild6
ProSiteProfiles PS51204 HSA domain profile.
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Coils Coil Coil
Gene3D G3DSA:3.40.50.300 -
CDD cd00167 SANT
CDD cd18003 DEXQc_SRCAP
Pfam PF00271 Helicase conserved C-terminal domain
SMART SM00573 bromneu2
PANTHER PTHR45685 HELICASE SRCAP-RELATED
Gene3D G3DSA:3.40.50.10810 -
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
ProSiteProfiles PS51294 Myb-type HTH DNA-binding domain profile.
ProSiteProfiles PS50090 Myb-like domain profile.
CDD cd18793 SF2_C_SNF
Gene3D G3DSA:1.10.10.60 -
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
FunFam G3DSA:1.20.120.850:FF:000012 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X3
FunFam G3DSA:3.40.50.10810:FF:000005 Photoperiod-independent early flowering 1
SMART SM00487 ultradead3
SUPERFAMILY SSF46689 Homeodomain-like
Pfam PF13921 Myb-like DNA-binding domain
Pfam PF07529 HSA domain
FunFam G3DSA:3.40.50.300:FF:000655 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1
Pfam PF00176 SNF2-related domain
KEGG K11661 helicase SRCAP/SWR1 [EC:5.6.2.-]
KOG KOG0391 SNF2 family DNA-dependent ATPase; C-term missing; [R]
KOG KOG4462 WASP-interacting protein VRP1/WIP, contains WH2 domain; N-term missing; [Z]
KOG KOG0391 SNF2 family DNA-dependent ATPase; C-term missing; [R]
MapolyID Mapoly0111s0052 -

Nomenclature

Gene symbol Product Transcript ID Status
Mpsnf1.21 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp7g15670.1 chr7:19489729..19507560 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.