Mp8g01420



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR47162 OS02G0192300 PROTEIN
Gene3D G3DSA:1.20.920.10 -
SMART SM00297 bromo_6
Pfam PF15613 Williams-Beuren syndrome DDT (WSD), D-TOX E motif
SUPERFAMILY SSF54171 DNA-binding domain
CDD cd04369 Bromodomain
Gene3D G3DSA:3.30.160.360 -
ProSiteProfiles PS51542 FYR domain FYRN motif profile.
SMART SM00249 PHD_3
ProSiteProfiles PS50016 Zinc finger PHD-type profile.
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger)
CDD cd15489 PHD_SF
SUPERFAMILY SSF57903 FYVE/PHD zinc finger
CDD cd15519 PHD1_Lid2p_like
Gene3D G3DSA:3.30.890.10 -
ProSitePatterns PS01359 Zinc finger PHD-type signature.
Pfam PF00628 PHD-finger
Pfam PF15612 WSTF, HB1, Itc1p, MBD9 motif 1
ProSiteProfiles PS50982 Methyl-CpG-binding domain (MBD) profile.
Pfam PF02791 DDT domain
SUPERFAMILY SSF47370 Bromodomain
Pfam PF05964 F/Y-rich N-terminus
ProSiteProfiles PS51543 FYR domain FYRC motif profile.
KOG KOG1244 Predicted transcription factor Requiem/NEURO-D4; N-term missing; [K]
KOG KOG4299 PHD Zn-finger protein; N-term missing; C-term missing; [R]
MapolyID Mapoly0064s0056 -

Nomenclature

Gene symbol Product Transcript ID Status
MpBromo12 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp8g01420.1 chr8:1547153..1562282 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.