Mp8g04400



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF47113 Histone-fold
FunFam G3DSA:1.10.20.10:FF:000035 Nuclear transcription factor Y subunit B-3
ProSitePatterns PS00685 NF-YB/HAP3 subunit signature.
PRINTS PR00615 CCAAT-binding transcription factor subunit A signature
PANTHER PTHR11064 CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED
Pfam PF00808 Histone-like transcription factor (CBF/NF-Y) and archaeal histone
Gene3D G3DSA:1.10.20.10 Histone, subunit A
KEGG K08065 nuclear transcription Y subunit beta
KOG KOG0869 CCAAT-binding factor, subunit A (HAP3); [K]
MapolyID Mapoly0216s0010 -

Nomenclature

Gene symbol Product Transcript ID Status
MpCCAAT-NFYB2 transcription factor, CCAAT-NFYB Published

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp8g04400.1 chr8:5552989..5556033 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g04400.2 chr8:5552989..5556059 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g04400.3 chr8:5552989..5556012 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g04400.4 chr8:5552989..5555571 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.