Mp8g15710



Description

Annotation

Database ID Description
ProSiteProfiles PS50102 Eukaryotic RNA Recognition Motif (RRM) profile.
SMART SM00360 rrm1_1
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM00361 rrm2_1
SUPERFAMILY SSF54928 RNA-binding domain, RBD
SMART SM00356 c3hfinal6
PANTHER PTHR12620 U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT
Pfam PF00076 RNA recognition motif
FunFam G3DSA:3.30.70.330:FF:000318 Zinc finger CCCH domain-containing protein 5
Coils Coil Coil
ProSiteProfiles PS50103 Zinc finger C3H1-type profile.
PRINTS PR01848 U2 auxiliary factor small subunit signature
Gene3D G3DSA:3.30.70.330 -
KEGG K24273 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein
KOG KOG2202 U2 snRNP splicing factor, small subunit, and related proteins; [A]
KOG KOG4364 Chromatin assembly factor-I; N-term missing; C-term missing; [B]
KOG KOG0670 U4/U6-associated splicing factor PRP4; C-term missing; [A]
KOG KOG4715 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin; N-term missing; [B]
MapolyID Mapoly0079s0042 -

Nomenclature

Gene symbol Product Transcript ID Status
MpC3H33 transcription factor, C3H Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp8g15710.1 chr8:20309223..20314119 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.