Mapoly0005s0159



Description

HB1, ASXL, restriction endonuclease HTH domain

Annotation

Database ID Description
GO GO:0003677 DNA binding
KOG KOG0484 Transcription factor PHOX2/ARIX, contains HOX domain
GO GO:0006355 regulation of transcription, DNA-dependent
PANTHER PTHR24326:SF155
PFAM PF00046 Homeobox domain
PFAM PF05066 HB1, ASXL, restriction endonuclease HTH domain
PANTHER PTHR24326 FAMILY NOT NAMED
PFAM PF02791 DDT domain
GO GO:0006351 transcription, DNA-dependent
PFAM PF15612 WSTF, HB1, Itc1p, MBD9 motif 1

Nomenclature

Gene symbol Product Transcript ID Status
MpDDT1 Homeodomain protein Public
MpHD1 transcription factor, HD Public

Transcript models

Transcript ID Location Sequences Extract region
Mapoly0005s0159.1 scaffold_5:1778246..1792027 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.