Mp1g04480



Description

Annotation

Database ID Description
KOG KOG0484 Transcription factor PHOX2/ARIX, contains HOX domain; C-term missing; [K]
MobiDBLite mobidb-lite consensus disorder prediction
Coils Coil -
Gene3D G3DSA:1.10.10.60 -
Pfam PF15613 Williams-Beuren syndrome DDT (WSD), D-TOX E motif
SUPERFAMILY SSF46689 -
SMART SM00389 -
ProSiteProfiles PS50827 DDT domain profile.
Pfam PF15612 WSTF, HB1, Itc1p, MBD9 motif 1
Pfam PF00046 Homeodomain
CDD cd00086 homeodomain
Pfam PF02791 DDT domain
Pfam PF05066 HB1, ASXL, restriction endonuclease HTH domain
ProSiteProfiles PS50071 'Homeobox' domain profile.
SMART SM00571 -
MapolyID Mapoly0005s0159.1

Nomenclature

Gene symbol Product Transcript ID Status
MpDDT1 Homeodomain protein Public
MpHD1 transcription factor, HD Public

Transcript models

Transcript ID Location Sequences Extract region
Mp1g04480.1 chr1:4778639..4791420 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.