Mp1g07350



Description

Annotation

Database ID Description
KOG KOG2744 DNA-binding proteins Bright/BRCAA1/RBP1 and related proteins containing BRIGHT domain; N-term missing; C-term missing; [K]
SUPERFAMILY SSF47095 -
SMART SM00398 -
ProSiteProfiles PS50118 HMG boxes A and B DNA-binding domains profile.
Gene3D G3DSA:1.10.30.10 -
SMART SM01014 -
Gene3D G3DSA:1.10.150.60 -
SUPERFAMILY SSF46774 -
Pfam PF01388 ARID/BRIGHT DNA binding domain
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF00505 HMG (high mobility group) box
CDD cd01390 HMGB-UBF_HMG-box
SMART SM00501 -
ProSiteProfiles PS51011 ARID domain profile.
MapolyID Mapoly0043s0128.1

Nomenclature

Gene symbol Product Transcript ID Status
MpARID-HMGBOX transcription factor, ARID-HMGbox Public

Transcript models

Transcript ID Location Sequences Extract region
Mp1g07350.1 chr1:7647565..7652816 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g07350.2 chr1:7645479..7652984 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g07350.3 chr1:7645479..7652968 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g07350.4 chr1:7647565..7652984 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.