Mp1g08030



Description

Annotation

Database ID Description
KEGG K08490 STX5; syntaxin 5
KOG KOG0812 SNARE protein SED5/Syntaxin 5; [U]
SUPERFAMILY SSF47661 -
Pfam PF05739 SNARE domain
ProSiteProfiles PS50192 t-SNARE coiled-coil homology domain profile.
SMART SM00397 -
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:1.20.5.110 -
CDD cd15844 SNARE_syntaxin5
MapolyID Mapoly0036s0047.1

Nomenclature

Gene symbol Product Transcript ID Status
MpSYP3 Ortholog of Arabidopsis SYP3 genes Published

Transcript models

Transcript ID Location Sequences Extract region
Mp1g08030.1 chr1:8386696..8392640 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g08030.2 chr1:8386602..8392640 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.