Mp1g08660



Description

Annotation

Database ID Description
KEGG K12236 NFX1; transcriptional repressor NF-X1
KOG KOG1952 Transcription factor NF-X1, contains NFX-type Zn2+-binding and R3H domains; [K]
SMART SM00438 -
CDD cd06008 NF-X1-zinc-finger
SUPERFAMILY SSF57903 -
SUPERFAMILY SSF82708 -
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:3.30.1370.50 -
ProSiteProfiles PS50016 Zinc finger PHD-type profile.
Pfam PF01422 NF-X1 type zinc finger
ProSiteProfiles PS51061 R3H domain profile.
CDD cd16696 RING-CH-C4HC3_NFX1
ProSitePatterns PS01359 Zinc finger PHD-type signature.
ProSiteProfiles PS50089 Zinc finger RING-type profile.
Pfam PF01424 R3H domain
MapolyID Mapoly0036s0109.1

Nomenclature

Gene symbol Product Transcript ID Status
MpNFX1-1 transcription factor, NF-X1 Public

Transcript models

Transcript ID Location Sequences Extract region
Mp1g08660.1 chr1:8884174..8891515 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g08660.2 chr1:8884174..8891515 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g08660.3 chr1:8884174..8891515 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.