Mp1g12750



Description

Annotation

Database ID Description
ProSiteProfiles PS51745 PB1 domain profile.
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF54277 -
Coils Coil -
Gene3D G3DSA:2.40.330.10 -
Gene3D G3DSA:3.10.20.90 -
Pfam PF02362 B3 DNA binding domain
SUPERFAMILY SSF101936 -
Pfam PF06507 Auxin response factor
SMART SM01019 -
Pfam PF02309 AUX/IAA family
ProSiteProfiles PS50863 B3 DNA-binding domain profile.
Gene3D G3DSA:2.30.30.1040 -
CDD cd10017 B3_DNA
MapolyID Mapoly0019s0045.1

Nomenclature

Gene symbol Product Transcript ID Status
MpARF1 Transcriptiion factor, similarity to Arabidopsis activator ARFs. Published

Transcript models

Transcript ID Location Sequences Extract region
Mp1g12750.1 chr1:12882032..12889700 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g12750.2 chr1:12882032..12889700 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.