Mp1g12970



Description

Annotation

Database ID Description
KEGG K08493 VTI1; vesicle transport through interaction with t-SNAREs 1
KOG KOG1666 V-SNARE; [U]
Coils Coil -
Gene3D G3DSA:1.20.5.110 -
Pfam PF12352 Snare region anchored in the vesicle membrane C-terminus
CDD cd15862 SNARE_Vti1
Pfam PF05008 Vesicle transport v-SNARE protein N-terminus
Gene3D G3DSA:1.20.58.400 -
SUPERFAMILY SSF58038 -
PIRSF PIRSF028865 -
SUPERFAMILY SSF47661 -
MapolyID Mapoly0019s0067.1

Nomenclature

Gene symbol Product Transcript ID Status
MpVTI1 Ortholog of Arabidopsis VTI1 genes Published

Transcript models

Transcript ID Location Sequences Extract region
Mp1g12970.1 chr1:13096377..13101111 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g12970.2 chr1:13096377..13101312 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.