Mp1g17220



Description

Annotation

Database ID Description
KOG KOG3065 SNAP-25 (synaptosome-associated protein) component of SNARE complex; N-term missing; [U]
SMART SM00397 -
Pfam PF05739 SNARE domain
CDD cd15841 SNARE_Qc
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50192 t-SNARE coiled-coil homology domain profile.
SUPERFAMILY SSF58038 -
Gene3D G3DSA:1.20.5.110 -
Coils Coil -
MapolyID Mapoly0001s0062.1

Nomenclature

Gene symbol Product Transcript ID Status
MpSYP7B.1 Ortholog of Arabidopsis SYP7 genes Published
MpSYP7B.2 Ortholog of Arabidopsis SYP7 genes Published

Transcript models

Transcript ID Location Sequences Extract region
Mp1g17220.1 chr1:17550705..17557404 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g17220.2 chr1:17550705..17557404 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.