Mp1g25160



Description

Annotation

Database ID Description
KOG KOG0105 Alternative splicing factor ASF/SF2 (RRM superfamily); C-term missing; [A]
Gene3D G3DSA:1.25.40.10 -
ProSiteProfiles PS51375 Pentatricopeptide (PPR) repeat profile.
SUPERFAMILY SSF81901 -
SUPERFAMILY SSF54928 -
CDD cd00590 RRM_SF
Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
TIGRFAM TIGR00756 PPR: pentatricopeptide repeat domain
Pfam PF01535 PPR repeat
Pfam PF13041 PPR repeat family
SMART SM00360 -
ProSiteProfiles PS50102 Eukaryotic RNA Recognition Motif (RRM) profile.
Gene3D G3DSA:3.30.70.330 -
Pfam PF17177 Pentacotripeptide-repeat region of PRORP
MapolyID Mapoly0061s0009.1

Nomenclature

Gene symbol Product Transcript ID Status
MpPPR_63 Pentatricopeptide repeat proteins Public

Transcript models

Transcript ID Location Sequences Extract region
Mp1g25160.1 chr1:25683920..25691214 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.