Mp3g15030



Description

Annotation

Database ID Description
KEGG K11654 SMARCA5, SNF2H, ISWI; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.4.-]
KOG KOG0385 Chromatin remodeling complex WSTF-ISWI, small subunit; [K]
SUPERFAMILY SSF101224 -
SUPERFAMILY SSF52540 -
Pfam PF09111 SLIDE
Coils Coil -
Gene3D G3DSA:3.40.50.300 -
MobiDBLite mobidb-lite consensus disorder prediction
CDD cd00079 HELICc
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
ProSiteProfiles PS51293 SANT domain profile.
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
Gene3D G3DSA:1.10.10.60 -
Pfam PF00271 Helicase conserved C-terminal domain
SMART SM00490 -
Gene3D G3DSA:1.10.1040.30 -
CDD cd00046 DEXDc
SMART SM00717 -
Gene3D G3DSA:3.40.50.10810 -
SUPERFAMILY SSF46689 -
CDD cd00167 SANT
SMART SM00487 -
Pfam PF00176 SNF2 family N-terminal domain
Pfam PF09110 HAND
MapolyID Mapoly0004s0169.1

Nomenclature

Gene symbol Product Transcript ID Status
Mp1R-MYB1 transcription factor, MYB Public

Transcript models

Transcript ID Location Sequences Extract region
Mp3g15030.1 chr3:14621404..14635443 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.