Mp4g02060



Description

Annotation

Database ID Description
KOG KOG4299 PHD Zn-finger protein; C-term missing; [R]
Pfam PF00628 PHD-finger
MobiDBLite mobidb-lite consensus disorder prediction
ProSitePatterns PS01359 Zinc finger PHD-type signature.
SMART SM00249 -
Gene3D G3DSA:1.10.10.60 -
SUPERFAMILY SSF46689 -
CDD cd00086 homeodomain
Pfam PF00046 Homeodomain
CDD cd15504 PHD_PRHA_like
SMART SM00389 -
ProSiteProfiles PS50016 Zinc finger PHD-type profile.
ProSiteProfiles PS50071 'Homeobox' domain profile.
SUPERFAMILY SSF57903 -
Gene3D G3DSA:3.30.40.10 -
MapolyID Mapoly0080s0093
GO GO:0003677 DNA binding

Nomenclature

Gene symbol Product Transcript ID Status
MpHD15 transcription factor, HD, homeodomain protein Published
MpPHD transcription factor, HD, homeodomain protein Published

Transcript models

Transcript ID Location Sequences Extract region
Mp4g02060.1 chr4:2421212..2441842 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g02060.2 chr4:2421212..2441842 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g02060.3 chr4:2421212..2441842 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g02060.4 chr4:2421212..2439153 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g02060.5 chr4:2421212..2439153 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g02060.6 chr4:2421212..2439153 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g02060.7 chr4:2421212..2439153 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.