Mp4g02060



Description

Annotation

Database ID Description
KOG KOG4299 PHD Zn-finger protein; C-term missing; [R]
Pfam PF00628 PHD-finger
MobiDBLite mobidb-lite consensus disorder prediction
ProSitePatterns PS01359 Zinc finger PHD-type signature.
SMART SM00249 -
Gene3D G3DSA:1.10.10.60 -
SUPERFAMILY SSF46689 -
CDD cd00086 homeodomain
Pfam PF00046 Homeodomain
CDD cd15504 PHD_PRHA_like
SMART SM00389 -
ProSiteProfiles PS50016 Zinc finger PHD-type profile.
ProSiteProfiles PS50071 'Homeobox' domain profile.
SUPERFAMILY SSF57903 -
Gene3D G3DSA:3.30.40.10 -
MapolyID Mapoly0080s0093.1

Nomenclature

Gene symbol Product Transcript ID Status
MpHD15 transcription factor, HD Public
MpPHD Homeodomain protein Public

Transcript models

Transcript ID Location Sequences Extract region
Mp4g02060.1 chr4:2421212..2441842 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g02060.2 chr4:2421212..2441842 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g02060.3 chr4:2421212..2441842 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g02060.4 chr4:2421212..2439153 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g02060.5 chr4:2421212..2439153 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g02060.6 chr4:2421212..2439153 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g02060.7 chr4:2421212..2439153 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.