Mp4g12650



Description

Annotation

Database ID Description
KEGG K11131 DKC1, NOLA4, CBF5; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
KOG KOG2529 Pseudouridine synthase; [J]
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF55120 -
Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain
Gene3D G3DSA:3.30.2350.10 -
SMART SM01136 -
Pfam PF01472 PUA domain
ProSiteProfiles PS50890 PUA domain profile.
Pfam PF08068 DKCLD (NUC011) domain
CDD cd02572 PseudoU_synth_hDyskerin
TIGRFAM TIGR00425 CBF5: putative rRNA pseudouridine synthase
TIGRFAM TIGR00451 unchar_dom_2: uncharacterized domain 2
Gene3D G3DSA:2.30.130.70 -
Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain)
SMART SM00359 -
SUPERFAMILY SSF88697 -
Coils Coil -
MapolyID Mapoly0138s0004.1

Nomenclature

Gene symbol Product Transcript ID Status
MpCBF5 transcription factor, CBF5 Public

Transcript models

Transcript ID Location Sequences Extract region
Mp4g12650.1 chr4:14172348..14174129 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.