Mp4g13380



Description

Annotation

Database ID Description
KEGG K03086 rpoD; RNA polymerase primary sigma factor
MobiDBLite mobidb-lite consensus disorder prediction
CDD cd06171 Sigma70_r4
TIGRFAM TIGR02997 Sig70-cyanoRpoD: RNA polymerase sigma factor, cyanobacterial RpoD-like family
Pfam PF04545 Sigma-70, region 4
Gene3D G3DSA:1.10.10.10 -
SUPERFAMILY SSF88659 -
PRINTS PR00046 Major sigma-70 factor signature
Pfam PF04542 Sigma-70 region 2
ProSitePatterns PS00715 Sigma-70 factors family signature 1.
Pfam PF00140 Sigma-70 factor, region 1.2
Gene3D G3DSA:1.10.601.10 -
Pfam PF04539 Sigma-70 region 3
PIRSF PIRSF000767 -
SUPERFAMILY SSF88946 -
TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family
ProSitePatterns PS00716 Sigma-70 factors family signature 2.
MapolyID Mapoly0214s0004.1

Nomenclature

Gene symbol Product Transcript ID Status
MpSIG2 Ortholog of Arabidopsis SIG2 gene Published

Transcript models

Transcript ID Location Sequences Extract region
Mp4g13380.1 chr4:14909151..14913404 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.