Mp5g03810



Description

Annotation

Database ID Description
KEGG K20715 PHOT; phototropin [EC:2.7.11.1]
KOG KOG0610 Putative serine/threonine protein kinase; [R]
CDD cd00130 PAS
Gene3D G3DSA:3.30.200.20 -
MobiDBLite mobidb-lite consensus disorder prediction
ProSitePatterns PS00107 Protein kinases ATP-binding region signature.
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
CDD cd05574 STKc_phototropin_like
SUPERFAMILY SSF56112 -
Pfam PF13426 PAS domain
Gene3D G3DSA:3.30.450.20 -
ProSiteProfiles PS50011 Protein kinase domain profile.
ProSiteProfiles PS50113 PAC domain profile.
SUPERFAMILY SSF55785 -
SMART SM00220 -
Gene3D G3DSA:1.10.510.10 -
SMART SM00091 -
SMART SM00086 -
TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein
ProSiteProfiles PS50112 PAS repeat profile.
Pfam PF00069 Protein kinase domain
MapolyID Mapoly0133s0008.1

Nomenclature

Gene symbol Product Transcript ID Status
MpPHOT blue-light receptor PHOTOTROPIN Published

Transcript models

Transcript ID Location Sequences Extract region
Mp5g03810.1 chr5:4267373..4278813 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g03810.2 chr5:4267373..4279172 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g03810.3 chr5:4267373..4278813 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g03810.4 chr5:4267373..4278051 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.