Mp7g09710



Description

Annotation

Database ID Description
KOG KOG0483 Transcription factor HEX, contains HOX and HALZ domains; C-term missing; [K]
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50071 'Homeobox' domain profile.
Gene3D G3DSA:3.30.530.20 -
SMART SM00234 -
SUPERFAMILY SSF55961 -
Pfam PF01852 START domain
ProSitePatterns PS00027 'Homeobox' domain signature.
CDD cd08875 START_ArGLABRA2_like
Pfam PF00046 Homeodomain
Gene3D G3DSA:1.10.10.60 -
CDD cd00086 homeodomain
SUPERFAMILY SSF46689 -
Coils Coil -
PRINTS PR00031 Lambda-repressor HTH signature
ProSiteProfiles PS50848 START domain profile.
SMART SM00389 -
MapolyID Mapoly0156s0012
GO GO:0043565 sequence-specific DNA binding
GO GO:0008289 lipid binding
GO GO:0006355 regulation of transcription, DNA-templated
GO GO:0003677 DNA binding

Nomenclature

Gene symbol Product Transcript ID Status
MpC4HDZ transcription factor, HD, homeodomain protein Published
MpHD18 transcription factor, HD, homeodomain protein Published

Transcript models

Transcript ID Location Sequences Extract region
Mp7g09710.1 chr7:10932485..10937881 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.