Mp7g13190



Description

Annotation

Database ID Description
KEGG K08486 STX1B_2_3; syntaxin 1B/2/3
KOG KOG0810 SNARE protein Syntaxin 1 and related proteins; [U]
Pfam PF00804 Syntaxin
SMART SM00503 -
CDD cd15848 SNARE_syntaxin1-like
Coils Coil -
Pfam PF05739 SNARE domain
Gene3D G3DSA:1.20.58.70 -
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF47661 -
SMART SM00397 -
CDD cd00179 SynN
ProSiteProfiles PS50192 t-SNARE coiled-coil homology domain profile.
ProSitePatterns PS00914 Syntaxin / epimorphin family signature.
Gene3D G3DSA:1.20.5.110 -
MapolyID Mapoly0009s0005.1

Nomenclature

Gene symbol Product Transcript ID Status
MpSYP13A Ortholog of Arabidopsis SYP13 genes Published

Transcript models

Transcript ID Location Sequences Extract region
Mp7g13190.1 chr7:14746674..14751760 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.