Mp8g15260



Description

Annotation

Database ID Description
KOG KOG0811 SNARE protein PEP12/VAM3/Syntaxin 7/Syntaxin 17; [U]
Gene3D G3DSA:1.20.58.70 -
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF14523 Syntaxin-like protein
SMART SM00397 -
ProSitePatterns PS00914 Syntaxin / epimorphin family signature.
SUPERFAMILY SSF47661 -
SMART SM00503 -
CDD cd15840 SNARE_Qa
Gene3D G3DSA:1.20.5.110 -
Pfam PF05739 SNARE domain
ProSiteProfiles PS50192 t-SNARE coiled-coil homology domain profile.
MapolyID Mapoly0187s0013.1

Nomenclature

Gene symbol Product Transcript ID Status
MpSYP2 Ortholog of Arabidopsis SYP2 genes Published

Transcript models

Transcript ID Location Sequences Extract region
Mp8g15260.1 chr8:17034287..17042553 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g15260.2 chr8:17037706..17042553 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g15260.3 chr8:17038572..17042553 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.