MpVg00300



Description

Annotation

Database ID Description
ProSitePatterns PS00344 GATA-type zinc finger domain.
Pfam PF06200 tify domain
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM00401 -
Pfam PF00320 GATA zinc finger
Pfam PF06203 CCT motif
ProSiteProfiles PS51017 CCT domain profile.
SUPERFAMILY SSF57716 -
ProSiteProfiles PS50114 GATA-type zinc finger domain profile.
ProSiteProfiles PS51320 Tify domain profile.
CDD cd00202 ZnF_GATA
SMART SM00979 -
Gene3D G3DSA:3.30.50.10 -
MapolyID MapolyY_B0021.1

Nomenclature

Gene symbol Product Transcript ID Status
MpGATA6 transcription factor, GATA Public

Transcript models

Transcript ID Location Sequences Extract region
MpVg00300.1 chrV:1475386..1502156 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
MpVg00300.2 chrV:1475386..1502156 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.