Mp1g01670



Description

Annotation

Database ID Description
KOG KOG1632 Uncharacterized PHD Zn-finger protein; [R]
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain
MobiDBLite mobidb-lite consensus disorder prediction
CDD cd15613 PHD_AL_plant
Pfam PF12165 Alfin
PANTHER PTHR12321:SF141 PHD FINGER PROTEIN ALFIN-LIKE 3-LIKE ISOFORM X1
Pfam PF00628 PHD-finger
SMART SM00249 PHD_3
ProSiteProfiles PS50016 Zinc finger PHD-type profile.
PANTHER PTHR12321 CPG BINDING PROTEIN
ProSitePatterns PS01359 Zinc finger PHD-type signature.
SUPERFAMILY SSF57903 FYVE/PHD zinc finger
GO GO:0042393 histone binding
GO GO:0006355 regulation of transcription, DNA-templated
MapolyID Mapoly0029s0079 -

Nomenclature

Gene symbol Product Transcript ID Status
MpALFIN1 transcription factor, Alfin1-like Published

Transcript models

Transcript ID Location Sequences Extract region
Mp1g01670.1 chr1:1876174..1882604 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g01670.2 chr1:1876420..1882249 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.