Mp1g04480



Description

Annotation

Database ID Description
KOG KOG0484 Transcription factor PHOX2/ARIX, contains HOX domain; C-term missing; [K]
SMART SM00389 HOX_1
PANTHER PTHR36968 HOMEOBOX-DDT DOMAIN PROTEIN RLT2
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF46689 Homeodomain-like
Coils Coil Coil
CDD cd00086 homeodomain
ProSiteProfiles PS50827 DDT domain profile.
Pfam PF00046 Homeodomain
Pfam PF15613 Williams-Beuren syndrome DDT (WSD), D-TOX E motif
SMART SM00571 testlast3
Pfam PF15612 WSTF, HB1, Itc1p, MBD9 motif 1
Pfam PF02791 DDT domain
PANTHER PTHR36968:SF5 HOMEOBOX-DDT DOMAIN PROTEIN RLT2
Pfam PF05066 HB1, ASXL, restriction endonuclease HTH domain
ProSiteProfiles PS50071 'Homeobox' domain profile.
Gene3D G3DSA:1.10.10.60 -
GO GO:0006351 transcription, DNA-templated
GO GO:0003677 DNA binding
GO GO:0006355 regulation of transcription, DNA-templated
MapolyID Mapoly0005s0159 -

Nomenclature

Gene symbol Product Transcript ID Status
MpDDT1 transcription factor, HD, homeodomain protein Published
MpHD1 transcription factor, HD, homeodomain protein Published

Transcript models

Transcript ID Location Sequences Extract region
Mp1g04480.1 chr1:4778639..4791420 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.