Mp1g07350



Description

Annotation

Database ID Description
KOG KOG2744 DNA-binding proteins Bright/BRCAA1/RBP1 and related proteins containing BRIGHT domain; N-term missing; C-term missing; [K]
KOG KOG0381 HMG box-containing protein; [R]
PANTHER PTHR46691:SF1 HIGH MOBILITY GROUP B PROTEIN 9
PANTHER PTHR46691 HIGH MOBILITY GROUP B PROTEIN 9
Gene3D G3DSA:1.10.30.10 DNA Binding (I)
SUPERFAMILY SSF46774 ARID-like
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM01014 ARID_2
Pfam PF01388 ARID/BRIGHT DNA binding domain
ProSiteProfiles PS50118 HMG boxes A and B DNA-binding domains profile.
SMART SM00398 hmgende2
SUPERFAMILY SSF47095 HMG-box
CDD cd16872 ARID_HMGB9-like
CDD cd01390 HMGB-UBF_HMG-box
Gene3D G3DSA:1.10.150.60 -
ProSiteProfiles PS51011 ARID domain profile.
Pfam PF00505 HMG (high mobility group) box
SMART SM00501 bright_3
GO GO:0003677 DNA binding
MapolyID Mapoly0043s0128 -

Nomenclature

Gene symbol Product Transcript ID Status
MpARID-HMGBOX transcription factor, ARID-HMGbox Published

Transcript models

Transcript ID Location Sequences Extract region
Mp1g07350.1 chr1:7648160..7652973 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.