Database | ID | Description |
---|---|---|
KOG | KOG4422 | Uncharacterized conserved protein; C-term missing; [S] |
ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. |
Pfam | PF12854 | PPR repeat |
MobiDBLite | mobidb-lite | consensus disorder prediction |
Pfam | PF13812 | Pentatricopeptide repeat domain |
Gene3D | G3DSA:1.25.40.10 | - |
TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain |
SUPERFAMILY | SSF48452 | TPR-like |
PANTHER | PTHR47942 | TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED |
Pfam | PF13041 | PPR repeat family |
GO | GO:0005515 | protein binding |
MapolyID | Mapoly0096s0019 | - |
Gene symbol | Product | Transcript ID | Status |
---|---|---|---|
MpPPR_51 | Pentatricopeptide repeat proteins | Published |
Sequences: |
Gene UTR + CDS + intron |
>Mp1g09820.1 ggccctttct ggctgcccgg aagacgtctg atcctgtgct ttctgacgac gatcttctga gcagatgagc acattcttcc agttcctgca ttccggaact gcggagtcgg tgtgcacctt ctattttgga ccttctctca ccagaaggga cggactggac tttggtcgat cccatcggac cgggcccgat tggtcgacat caggaggaaa gaacgtggtt cagtcttctc gatcgatgac taaccgagtg gatgaagaag attctcgagg cttcgattct taactgcgct gtgcaggttc gttgattttc gcgtgagaat atttggcacg ctctcctctt tcaggaggaa gtgatcagca ggacgaaaga ggtcaacacc cggacagggt tatccttttc gtaggatatg aagattttag taataaagaa tgtaagggat tctacatctg aagactagac agggggaact ctacttcttt attcttgcgg cgggcatgga tgaggagacg agggatgagc catgctcgtc ttgtctccac tctgtcaagg gtgaccaatt ccataaaccc taagcccttg atctggaaag tctgcacttg gtgacggtga tgatgcaata gagggcggtg agagcgtgga caaccctcga gctgccaatt gagcactcac ctcggggttt tcgaatgggc tctgattgac ttactctcga aatggccttg tttcggtcac cacattgttt ggatctggaa atgagacgtg agtcttgagc gagtggtcga gaatggggtg ctgttacttg tgaggatgga ggagtgcccg gcatcgaccg agtttgtcat tgttgcttgt tgttgtctgc ctgcccgcct ggcgtgctcc gttcacctgc tggcattgct gtcgatctga tcatgatagc agacgttcgt ctttgcggcg taacaacttt tttgtcaagt gcacggaggg agaaagcaca aagcaggggc cgaatgtcca atcgtctgca cgccttccca atatgggcga ttcgttgtta ggtctctgat attgtgtgtc cttgaaaagc tcgcctctag atatcccctc ttttgtgatc tgagtatgtc ggattctcct gccgctcatg aattccgagc attgttttga ccaacggatg ctgatcttgt tcttgccctt gtgggttgca ggctgatacc gcacctttct ctaagcatgg gtagtaggct tgttctactc cggcagtctc atctccagag gtagggcgag gttcgtgccc gtgcctggac gctgcctctc tggagcattg aagttaagta gcggccggca agcgtgacaa tcaggaggga tgaaaggaat ttgagttgtt ggagggctgc ggacgttgca acgtctcctt ccatttcaga ttcaaatgaa atctcttcaa cgatccacga ctttaccatt gctcctgcgt aaaagatggg gagaattgcg atttgtgcct ggtgtagatg cacgtgtttt tgcaagatct gagctgcaga ggatttcctc cgcagccgca aatggaagcc aggaaaatgt tcgacagggt tttgtcaatg atattactac agacgatgct caaagatgga gctttttgtc aaaattaagg ttcttggcag ccgggggatt ggagctgcaa ggtgtgaggt tttcgtcgac ttggtctgca gtggaatatg tggagggctc gacccagaca tggttaagag agtaccgcct ggggcttaaa gaaagtcaga gaatagaaga ggacagagtt gaaaatgggg tgcatcattc taacgccaga gtgcagaaaa gtcatcatca gactgatcat catcgaggac agtgggcgaa aatatacggg catggaagag acgaaaaggt ggccagagtc tgccgacttc ttacagggaa gaaatggtgg ggacctgacc ttatctcaac attggatcga atggaactgt cacttgagcc ttacattgtg aatcaaattt tgaagcagca gcagagagtt caagtggccg tgggtttctt tcagtgggct aaggaacaaa agggatataa gcataatact tgtgtgtaca ataccatgat tggaatcgtg ggcagtaata aggattttgt agcgatgaaa ggtctaatgg aggaaatgct gcgcgatggt tgtgagccta atgcagtcac attcacagtg atcattcgaa gctttggtgc caaaaaaatc gacaaagctg ttgacacctt tgagcatatg aaggaattcg gttttcctcc agatgttgca acttataact gcttaatcga cttgctcata aaggcaggag atgatcagaa ggcctggagc tacttcgaaa aactgaaaga gtctgggctg gagccggata ggatcaccca caacattttg tacagcagct ttgtcaagtg tggcagagtg gatgatgcgt gctcgctcac gaaatctcat cttcctgtga gcaagtacaa ctccttaata cattttctgg gaagaggcaa taatttggag gatgccttga aggtcttcca caatatgcaa gtcagaggca agcccgacaa tttcacatat tcgtccctca ttacattctt tgggaaggct ggcaaagtag atgctgcttg ggagttcttt caggaaatga aaagatctgg atgtaaaccc gatgtggtgg tatatagtgc aattatgagt gcttttcgga aggctggtaa agcagaccag gttcttggcc tgttcagcga gatgaaaaga caaggttgtg agccagatcg agaatcatac agtgatctca ttcattcctt agtggaagcg agtagaccag aattagcgtg taagtttctg gaggagatga aggaaagagg atttgaacca aagatcacaa cctactcgga tgttctgtgg atgctgggaa aggcaggtat tattgaagag gccgtcagaa tcttccagga gatgaaagga ctgtggcgga agcccagggt gaattcttat cactcaatga tcgttgcatt cagtttggcc ggaagaatgg ctgacgccat ggatatattc aaggaatctc aagaggttgg ctgcataccg gttagtgata tgtactccga tctgatccac ggattctgca aagtcgggga cattggttct gcccgtgagc tgtttcttga gatgaatgct aagggttttt tccttgacct tctgacgtat aacgttctca ttaattcctt atgcaaagcg aaacgggtag atgaggcctt gcaactcttg aagaaaatgc ctgaaaacgg gtgcattccc aacgtcgtat catatactac cctcatccga ggttttggtg ataccggtcg ggatgatttg gcattttccc tgttcaaaga aatgaaggag aaaggttgca cgccgaatgt aatcacattc aatacgctga tcaacatgtt gactaagaaa ggaaagtctc atgaggccta caagctcatt caagaaatgg agcaaagcgg ctgtcctctg aatgactgta ccatgcttaa cgtggaacga cttgtgtcga atgaagatca aggttgaaca gcattttcac tgtcagtata acgaagacgg agaagtctgg ccgtgccgta aaactatagt acgtatcttt cttaatctca tattctttct gctttaaccg tattgtgctg tgtcatgttt ctagcatcgt ttatctacga aatacgatca gggttgatgt gtagttcaaa agataccaaa atagcagtac cattccattg attcatcgct tcatcaaccc tgagacggga ggtatgacca atagcagact agcagaagag aatagtgcgc tggcatggtg gcatcagcat tctcttattt ttaaagattg ataacattgt tttcttaagc cgggttcaga aatttaacct tcaaagttta tttaaaactt cgctaacacc ttttattcca accttcagat acatttgcca gctcatcgtg acttcagata gctatgggtc gaggtttcaa caaatcatgt ttctgactgt ttagtccagc ctgctttacc gctaaagacg ggcaacatga agaagtttaa tcagaggata gtggtatgca actgtagtca tcaacaacga ggacaacggg tatagatatc tttcaacaaa tgtacatgga ttacatcgca tcttcttcct agaggtttct aactcatcat ttatggcgta agtttacaaa tggtgatgat tcgatcacat gctatgatgg cacagtgctg gtgttgaatt atatgtgtag gagaacatct gggaattata atcaagctct aattggtagg ttcgtgaagc gcttactttg cgaacggtac tagtaatgga gcttccttca gaccatgttc attttcagtt agaagctagt aagaatgttt agaaatcttg at |
mRNA UTR + CDS |
>Mp1g09820.1 ggccctttct ggctgcccgg aagacgtctg atcctgtgct ttctgacgac gatcttctga gcagatgagc acattcttcc agttcctgca ttccggaact gcggagtcgg tgtgcacctt ctattttgga ccttctctca ccagaaggga cggactggac tttggtcgat cccatcggac cgggcccgat tggtcgacat caggaggaaa gaacgtggtt cagtcttctc gatcgatgac taaccgagtg gatgaagaag attctcgagg cttcgattct taactgcgct gtgcaggttc gttgattttc gcgtgagaat atttggcacg ctctcctctt tcaggaggaa gtgatcagca ggacgaaaga ggtcaacacc cggacagggt tatccttttc gtaggatatg aagattttag taataaagaa tgtaagggat tctacatctg aagactagac agggggaact ctacttcttt attcttgcgg cgggcatgga tgaggagacg agggatgagc catgctcgtc ttgtctccac tctgtcaagg gtgaccaatt ccataaaccc taagcccttg atctggaaag tctgcacttg gtgacggtga tgatgcaata gagggcggtg agagcgtgga caaccctcga gctgccaatt gagcactcac ctcggggttt tcgaatgggc tctgattgac ttactctcga aatggccttg tttcggtcac cacattgttt ggatctggaa atgagacgtg agtcttgagc gagtggtcga gaatggggtg ctgttacttg tgaggatgga ggagtgcccg gcatcgaccg agtttgtcat tgttgcttgt tgttgtctgc ctgcccgcct ggcgtgctcc gttcacctgc tggcattgct gtcgatctga tcatgatagc agacgttcgt ctttgcggcg taacaacttt tttgtcaagt gcacggaggg agaaagcaca aagcaggggc cgaatgtcca atcgtctgca cgccttccca atatgggcga ttcgttgtta ggctgatacc gcacctttct ctaagcatgg gtagtaggct tgttctactc cggcagtctc atctccagag gtagggcgag gttcgtgccc gtgcctggac gctgcctctc tggagcattg aagttaagta gcggccggca agcgtgacaa tcaggaggga tgaaaggaat ttgagttgtt ggagggctgc ggacgttgca acgtctcctt ccatttcaga ttcaaatgaa atctcttcaa cgatccacga ctttaccatt gctcctgcgt aaaagatggg gagaattgcg atttgtgcct ggtgtagatg cacgtgtttt tgcaagatct gagctgcaga ggatttcctc cgcagccgca aatggaagcc aggaaaatgt tcgacagggt tttgtcaatg atattactac agacgatgct caaagatgga gctttttgtc aaaattaagg ttcttggcag ccgggggatt ggagctgcaa ggtgtgaggt tttcgtcgac ttggtctgca gtggaatatg tggagggctc gacccagaca tggttaagag agtaccgcct ggggcttaaa gaaagtcaga gaatagaaga ggacagagtt gaaaatgggg tgcatcattc taacgccaga gtgcagaaaa gtcatcatca gactgatcat catcgaggac agtgggcgaa aatatacggg catggaagag acgaaaaggt ggccagagtc tgccgacttc ttacagggaa gaaatggtgg ggacctgacc ttatctcaac attggatcga atggaactgt cacttgagcc ttacattgtg aatcaaattt tgaagcagca gcagagagtt caagtggccg tgggtttctt tcagtgggct aaggaacaaa agggatataa gcataatact tgtgtgtaca ataccatgat tggaatcgtg ggcagtaata aggattttgt agcgatgaaa ggtctaatgg aggaaatgct gcgcgatggt tgtgagccta atgcagtcac attcacagtg atcattcgaa gctttggtgc caaaaaaatc gacaaagctg ttgacacctt tgagcatatg aaggaattcg gttttcctcc agatgttgca acttataact gcttaatcga cttgctcata aaggcaggag atgatcagaa ggcctggagc tacttcgaaa aactgaaaga gtctgggctg gagccggata ggatcaccca caacattttg tacagcagct ttgtcaagtg tggcagagtg gatgatgcgt gctcgctcac gaaatctcat cttcctgtga gcaagtacaa ctccttaata cattttctgg gaagaggcaa taatttggag gatgccttga aggtcttcca caatatgcaa gtcagaggca agcccgacaa tttcacatat tcgtccctca ttacattctt tgggaaggct ggcaaagtag atgctgcttg ggagttcttt caggaaatga aaagatctgg atgtaaaccc gatgtggtgg tatatagtgc aattatgagt gcttttcgga aggctggtaa agcagaccag gttcttggcc tgttcagcga gatgaaaaga caaggttgtg agccagatcg agaatcatac agtgatctca ttcattcctt agtggaagcg agtagaccag aattagcgtg taagtttctg gaggagatga aggaaagagg atttgaacca aagatcacaa cctactcgga tgttctgtgg atgctgggaa aggcaggtat tattgaagag gccgtcagaa tcttccagga gatgaaagga ctgtggcgga agcccagggt gaattcttat cactcaatga tcgttgcatt cagtttggcc ggaagaatgg ctgacgccat ggatatattc aaggaatctc aagaggttgg ctgcataccg gttagtgata tgtactccga tctgatccac ggattctgca aagtcgggga cattggttct gcccgtgagc tgtttcttga gatgaatgct aagggttttt tccttgacct tctgacgtat aacgttctca ttaattcctt atgcaaagcg aaacgggtag atgaggcctt gcaactcttg aagaaaatgc ctgaaaacgg gtgcattccc aacgtcgtat catatactac cctcatccga ggttttggtg ataccggtcg ggatgatttg gcattttccc tgttcaaaga aatgaaggag aaaggttgca cgccgaatgt aatcacattc aatacgctga tcaacatgtt gactaagaaa ggaaagtctc atgaggccta caagctcatt caagaaatgg agcaaagcgg ctgtcctctg aatgactgta ccatgcttaa cgtggaacga cttgtgtcga atgaagatca aggttgaaca gcattttcac tgtcagtata acgaagacgg agaagtctgg ccgtgccgta aaactataat acatttgcca gctcatcgtg acttcagata gctatgggtc gaggtttcaa caaatcatgt ttctgactgt ttagtccagc ctgctttacc gctaaagacg ggcaacatga agaagtttaa tcagaggata gtggtatgca actgtagtca tcaacaacga ggacaacggg tatagatatc tttcaacaaa tgtacatgga ttacatcgca tcttcttcct agaggtttct aactcatcat ttatggcgta agtttacaaa tggtgatgat tcgatcacat gctatgatgg cacagtgctg gtgttgaatt atatgtgtag gagaacatct gggaattata atcaagctct aattggtagg ttcgtgaagc gcttactttg cgaacggtac tagtaatgga gcttccttca gaccatgttc attttcagtt agaagctagt aagaatgttt agaaatcttg at |
CDS |
>Mp1g09820.1 atgaaatctc ttcaacgatc cacgacttta ccattgctcc tgcgtaaaag atggggagaa ttgcgatttg tgcctggtgt agatgcacgt gtttttgcaa gatctgagct gcagaggatt tcctccgcag ccgcaaatgg aagccaggaa aatgttcgac agggttttgt caatgatatt actacagacg atgctcaaag atggagcttt ttgtcaaaat taaggttctt ggcagccggg ggattggagc tgcaaggtgt gaggttttcg tcgacttggt ctgcagtgga atatgtggag ggctcgaccc agacatggtt aagagagtac cgcctggggc ttaaagaaag tcagagaata gaagaggaca gagttgaaaa tggggtgcat cattctaacg ccagagtgca gaaaagtcat catcagactg atcatcatcg aggacagtgg gcgaaaatat acgggcatgg aagagacgaa aaggtggcca gagtctgccg acttcttaca gggaagaaat ggtggggacc tgaccttatc tcaacattgg atcgaatgga actgtcactt gagccttaca ttgtgaatca aattttgaag cagcagcaga gagttcaagt ggccgtgggt ttctttcagt gggctaagga acaaaaggga tataagcata atacttgtgt gtacaatacc atgattggaa tcgtgggcag taataaggat tttgtagcga tgaaaggtct aatggaggaa atgctgcgcg atggttgtga gcctaatgca gtcacattca cagtgatcat tcgaagcttt ggtgccaaaa aaatcgacaa agctgttgac acctttgagc atatgaagga attcggtttt cctccagatg ttgcaactta taactgctta atcgacttgc tcataaaggc aggagatgat cagaaggcct ggagctactt cgaaaaactg aaagagtctg ggctggagcc ggataggatc acccacaaca ttttgtacag cagctttgtc aagtgtggca gagtggatga tgcgtgctcg ctcacgaaat ctcatcttcc tgtgagcaag tacaactcct taatacattt tctgggaaga ggcaataatt tggaggatgc cttgaaggtc ttccacaata tgcaagtcag aggcaagccc gacaatttca catattcgtc cctcattaca ttctttggga aggctggcaa agtagatgct gcttgggagt tctttcagga aatgaaaaga tctggatgta aacccgatgt ggtggtatat agtgcaatta tgagtgcttt tcggaaggct ggtaaagcag accaggttct tggcctgttc agcgagatga aaagacaagg ttgtgagcca gatcgagaat catacagtga tctcattcat tccttagtgg aagcgagtag accagaatta gcgtgtaagt ttctggagga gatgaaggaa agaggatttg aaccaaagat cacaacctac tcggatgttc tgtggatgct gggaaaggca ggtattattg aagaggccgt cagaatcttc caggagatga aaggactgtg gcggaagccc agggtgaatt cttatcactc aatgatcgtt gcattcagtt tggccggaag aatggctgac gccatggata tattcaagga atctcaagag gttggctgca taccggttag tgatatgtac tccgatctga tccacggatt ctgcaaagtc ggggacattg gttctgcccg tgagctgttt cttgagatga atgctaaggg ttttttcctt gaccttctga cgtataacgt tctcattaat tccttatgca aagcgaaacg ggtagatgag gccttgcaac tcttgaagaa aatgcctgaa aacgggtgca ttcccaacgt cgtatcatat actaccctca tccgaggttt tggtgatacc ggtcgggatg atttggcatt ttccctgttc aaagaaatga aggagaaagg ttgcacgccg aatgtaatca cattcaatac gctgatcaac atgttgacta agaaaggaaa gtctcatgag gcctacaagc tcattcaaga aatggagcaa agcggctgtc ctctgaatga ctgtaccatg cttaacgtgg aacgacttgt gtcgaatgaa gatcaaggtt ga |
Protein |
>Mp1g09820.1 MKSLQRSTTL PLLLRKRWGE LRFVPGVDAR VFARSELQRI SSAAANGSQE NVRQGFVNDI TTDDAQRWSF LSKLRFLAAG GLELQGVRFS STWSAVEYVE GSTQTWLREY RLGLKESQRI EEDRVENGVH HSNARVQKSH HQTDHHRGQW AKIYGHGRDE KVARVCRLLT GKKWWGPDLI STLDRMELSL EPYIVNQILK QQQRVQVAVG FFQWAKEQKG YKHNTCVYNT MIGIVGSNKD FVAMKGLMEE MLRDGCEPNA VTFTVIIRSF GAKKIDKAVD TFEHMKEFGF PPDVATYNCL IDLLIKAGDD QKAWSYFEKL KESGLEPDRI THNILYSSFV KCGRVDDACS LTKSHLPVSK YNSLIHFLGR GNNLEDALKV FHNMQVRGKP DNFTYSSLIT FFGKAGKVDA AWEFFQEMKR SGCKPDVVVY SAIMSAFRKA GKADQVLGLF SEMKRQGCEP DRESYSDLIH SLVEASRPEL ACKFLEEMKE RGFEPKITTY SDVLWMLGKA GIIEEAVRIF QEMKGLWRKP RVNSYHSMIV AFSLAGRMAD AMDIFKESQE VGCIPVSDMY SDLIHGFCKV GDIGSARELF LEMNAKGFFL DLLTYNVLIN SLCKAKRVDE ALQLLKKMPE NGCIPNVVSY TTLIRGFGDT GRDDLAFSLF KEMKEKGCTP NVITFNTLIN MLTKKGKSHE AYKLIQEMEQ SGCPLNDCTM LNVERLVSNE DQG |