Mp1g12070



Description

Annotation

Database ID Description
KEGG K08506 SYP7; syntaxin of plants SYP7
KOG KOG3202 SNARE protein TLG1/Syntaxin 6; [U]
Pfam PF05739 SNARE domain
Coils Coil Coil
ProSiteProfiles PS50192 t-SNARE coiled-coil homology domain profile.
Gene3D G3DSA:1.20.5.110 -
PANTHER PTHR19957 SYNTAXIN
PANTHER PTHR19957:SF264 SYNTAXIN-73
ProSitePatterns PS00914 Syntaxin / epimorphin family signature.
SMART SM00397 tSNARE_6
CDD cd15841 SNARE_Qc
SUPERFAMILY SSF58038 SNARE fusion complex
GO GO:0005484 SNAP receptor activity
GO GO:0016020 membrane
GO GO:0006886 intracellular protein transport
MapolyID Mapoly0014s0021 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSYP7A Ortholog of Arabidopsis SYP7 genes Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g12070.1 chr1:12284377..12287853 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g12070.2 chr1:12284560..12287970 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g12070.3 chr1:12284482..12287935 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.