Mp1g12070



Description

Annotation

Database ID Description
KEGG K08506 SYP7; syntaxin of plants SYP7
KOG KOG3202 SNARE protein TLG1/Syntaxin 6; [U]
Pfam PF05739 SNARE domain
Coils Coil Coil
ProSiteProfiles PS50192 t-SNARE coiled-coil homology domain profile.
Gene3D G3DSA:1.20.5.110 -
PANTHER PTHR19957 SYNTAXIN
PANTHER PTHR19957:SF264 SYNTAXIN-73
ProSitePatterns PS00914 Syntaxin / epimorphin family signature.
SMART SM00397 tSNARE_6
CDD cd15841 SNARE_Qc
SUPERFAMILY SSF58038 SNARE fusion complex
GO GO:0005484 SNAP receptor activity
GO GO:0016020 membrane
GO GO:0006886 intracellular protein transport
MapolyID Mapoly0014s0021 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSYP7A Ortholog of Arabidopsis SYP7 genes Published

Transcript models

Transcript ID Location Sequences Extract region
Mp1g12070.1 chr1:12284377..12287853 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g12070.2 chr1:12284560..12287970 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g12070.3 chr1:12284482..12287935 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.