Mp1g12750



Description

Annotation

Database ID Description
Pfam PF02362 B3 DNA binding domain
ProSiteProfiles PS50863 B3 DNA-binding domain profile.
PANTHER PTHR31384:SF115 AUXIN RESPONSE FACTOR 6
PANTHER PTHR31384 AUXIN RESPONSE FACTOR 4-RELATED
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF02309 AUX/IAA family
SUPERFAMILY SSF101936 DNA-binding pseudobarrel domain
Gene3D G3DSA:2.30.30.1040 -
Gene3D G3DSA:2.40.330.10 -
ProSiteProfiles PS51745 PB1 domain profile.
SMART SM01019 B3_2
SUPERFAMILY SSF54277 CAD & PB1 domains
Coils Coil Coil
Gene3D G3DSA:3.10.20.90 -
Pfam PF06507 Auxin response factor
CDD cd10017 B3_DNA
GO GO:0005634 nucleus
GO GO:0009725 response to hormone
GO GO:0003677 DNA binding
GO GO:0006355 regulation of transcription, DNA-templated
GO GO:0005515 protein binding
MapolyID Mapoly0019s0045 -

Nomenclature

Gene symbol Product Transcript ID Status
MpARF1 Transcription factor, similarity to Arabidopsis activator ARFs. Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g12750.1 chr1:12882032..12890074 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.