Mp1g12750



Description

Annotation

Database ID Description
Pfam PF02362 B3 DNA binding domain
ProSiteProfiles PS50863 B3 DNA-binding domain profile.
PANTHER PTHR31384:SF115 AUXIN RESPONSE FACTOR 6
PANTHER PTHR31384 AUXIN RESPONSE FACTOR 4-RELATED
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF02309 AUX/IAA family
SUPERFAMILY SSF101936 DNA-binding pseudobarrel domain
Gene3D G3DSA:2.30.30.1040 -
Gene3D G3DSA:2.40.330.10 -
ProSiteProfiles PS51745 PB1 domain profile.
SMART SM01019 B3_2
SUPERFAMILY SSF54277 CAD & PB1 domains
Coils Coil Coil
Gene3D G3DSA:3.10.20.90 -
Pfam PF06507 Auxin response factor
CDD cd10017 B3_DNA
GO GO:0005634 nucleus
GO GO:0009725 response to hormone
GO GO:0003677 DNA binding
GO GO:0006355 regulation of transcription, DNA-templated
GO GO:0005515 protein binding
MapolyID Mapoly0019s0045 -

Nomenclature

Gene symbol Product Transcript ID Status
MpARF1 Transcriptiion factor, similarity to Arabidopsis activator ARFs. Published

Transcript models

Transcript ID Location Sequences Extract region
Mp1g12750.1 chr1:12882032..12890074 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.