Mp1g13640



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF03110 SBP domain
PANTHER PTHR31251 SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4
Gene3D G3DSA:4.10.1100.10 -
ProSiteProfiles PS51141 Zinc finger SBP-type profile.
SUPERFAMILY SSF48403 Ankyrin repeat
SUPERFAMILY SSF103612 SBT domain
Gene3D G3DSA:1.25.40.20 -
PANTHER PTHR31251:SF110 SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 14
GO GO:0005634 nucleus
GO GO:0003677 DNA binding
MapolyID Mapoly0019s0134 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSPL3 transcription factor, SPL Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g13640.1 chr1:13644432..13655154 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g13640.2 chr1:13644446..13655153 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.