Mp1g18030



Description

Annotation

Database ID Description
ProSiteProfiles PS51375 Pentatricopeptide (PPR) repeat profile.
Pfam PF01535 PPR repeat
PANTHER PTHR47594 PPR CONTAINING PLANT-LIKE PROTEIN
TIGRFAM TIGR00756 PPR: pentatricopeptide repeat domain
PANTHER PTHR47594:SF5 PPR CONTAINING PLANT-LIKE PROTEIN
Gene3D G3DSA:1.25.40.10 -
GO GO:0003723 RNA binding
GO GO:0009658 chloroplast organization
GO GO:0005515 protein binding
GO GO:0000373 Group II intron splicing
MapolyID Mapoly0001s0141 -

Nomenclature

Gene symbol Product Transcript ID Status
MpPPR_2 Pentatricopeptide repeat proteins Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g18030.1 chr1:18328276..18331396 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g18030.2 chr1:18328259..18332286 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g18030.3 chr1:18328259..18332286 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g18030.4 chr1:18328276..18331396 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g18030.5 chr1:18328276..18331396 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g18030.6 chr1:18328276..18331396 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.