Database | ID | Description |
---|---|---|
KOG | KOG1632 | Uncharacterized PHD Zn-finger protein; [R] |
MobiDBLite | mobidb-lite | consensus disorder prediction |
ProSitePatterns | PS01359 | Zinc finger PHD-type signature. |
Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain |
PANTHER | PTHR12321 | CPG BINDING PROTEIN |
Pfam | PF12165 | Alfin |
SMART | SM00249 | PHD_3 |
PANTHER | PTHR12321:SF122 | PHD FINGER PROTEIN ALFIN-LIKE 2 |
SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger |
ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. |
GO | GO:0042393 | histone binding |
GO | GO:0006355 | regulation of transcription, DNA-templated |
MapolyID | Mapoly0065s0031 | - |
Gene symbol | Product | Transcript ID | Status |
---|---|---|---|
MpALFIN2 | transcription factor, Alfin1-like | Published |
Sequences: |
Gene UTR + CDS + intron |
>Mp1g23460.1 attgcaagca tatatcggga acgaatcctg ccgttgtggt cttgttgcgt agcctgacta caggtgcccc gcccaaccac gatatcacga cgcatctctg cctgcctggg tggggtgcct gggaaagttg aatcaactat gctgagagat tttcagtgga gggcaatcca ggacttcgag cgagcaggga tgccgaagga aactgtgctg cgagtctgca gatactgtaa gttctgtcaa ctgcaatgca cggttgtttc tatgttgatg aatgggagag gacctcactc gtggagtctg tctgtctgtc tgctgacaaa cccaagaatt accgccctgc gaaagtcgct tctccgattg agttcctgcc ggttttccaa tggcgaacag atacatcatc agacggaact gaagggtcag gtcttacggt accagcagca gagaataacc acccacacaa ttttggtgtt tccatctgct acataaagaa gtgacagaag cgagggggac accgctacaa aactagctcg atgtgcgata tctcacacag ggccagaaga gcagagtatc agttaccgca gtgtaagagc gggagagttc aaaacgccgc acgattctcg ctgaatctga atattgacca ctttggtgaa tcacccgacg tgagcgagaa cgaagatcga tgtaggaaca ctgtggacgg actggttcag atttgctctg cgcgtccggg gtttcagcag tttctttact gagagtttgt gtcgttttgt tgtgtgcagg acgaggctcg gatgacgggt tgaagcttcg gcgaatcagt ggttcaaaga ccatgaacca gaagattcag gatgttctcg accctaagtt tgaaaacgtc gaagtaatct atgctgccgt caagaggagg caggcaggaa tcatcaaggc attgacgatg gagtcggacg aactctttcg acaatgtgac ccagagacgg acaacttgtg cttgtacggg ctaccggatg gaggatggaa agttgcactt ccagcacaag atgttcctac agaacttcca gaacctgccc tagggataaa ttttgccagg gacggaatgt cacgccaaga ttggttgact ctaattgccc tacacagtga tgcttggctc ctcgcgatag cgtcctttta cggcgctgag ctcaccagaa acgaaagaaa acggcttctc gtcatgcttg gcgactcacc cacgtcctac gatatagtca ctggcaagaa cgtcgacgat tctcttgact acagcagagt tcatcacatc aaggccatcg acgcttgcag tcttcccatg atcacgggcg ggtccaagga cgaaattcga gtaaagcaag tgatcacgga cgagaatgac agaggcagaa tgatctcgaa tcatacgttc ttggcgccaa aagcggtgac caaccccgca actccacaca aacaatggga gcaagtgctg ccggcaattc ctcgatctgt cgaaaattgt aggaatcaat tcgcggagcc agcaaaagta gtgtctgaag ctccctgcgt gccggagatg gctcagtcca ttcacatgaa cgcaactgct gcagtcgatg atttgtcagt gccccaggca gatcccgagg tgccggaggc cagcggctct gcacctcgcg agagagagag gccccctgcc cgcctccgga ccaagaggca aacgaagcca agaaacacgt tcgctttgga tttcctcgac accgtggact tctcgtcaga cgacgacgac ggcgacgacc gtgacggcac cgtctgcgaa atctgtcgag ccgggaacgt tggcgacagc gtgacccact gggtggcatg cgattgctgc gagaagtggt tccactgcaa gtgcgtcaaa atcacgccgg ccaaagcgca gcatctgaag ctctacaagt gcccgacgtg cgccagcaag aaggctccct ttcagctgtt ttgaatctga gtccgggacc acaccggtca caccggtcgg accgaatcac gcacggtacg gtacagacga ggacgggtga caacgcctgc tccgcccgcg cgtacctttc tctttgtcga tgcgacaagc acgtctgcga ctgcaatcac ggtagacgta cagacggagc cctctgtcag aagcggtcga ggcgaacgag aatcgtagat tctgaagaaa cctcagaatg aagacgcaag cttgtacacg tcagcgcatc tgatgccttc cttggattct tcccgtgtcg ctgcgcttac tgcagttgga ggacaagcgc gcgcttgatc ttcgtagacc atgtgtatcg tcttactgcg caaggtatcg tagacgtaga agacgtgggg tcggaatact gtacatggac gaaaggcaag gttgtctcgt ttggtcgtgg tcgactttcc tgaagctagg atgaaacgcc ggcggatgct gaacatagtg gacgatttta ttgcacagtt catgttggaa tgtgacacga cgttcgtatt atgtctatac gtagttagaa acgtggattg ttcttgagta acctacttag tagattcgaa cgagatattg accggtcc |
mRNA UTR + CDS |
>Mp1g23460.1 attgcaagca tatatcggga acgaatcctg ccgttgtggt cttgttgcgt agcctgacta caggtgcccc gcccaaccac gatatcacga cgcatctctg cctgcctggg tggggtgcct gggaaagttg aatcaactat gctgagagat tttcagtgga gggcaatcca ggacttcgag cgagcaggga tgccgaagga aactgtgctg cgagtctgca gatactgacg aggctcggat gacgggttga agcttcggcg aatcagtggt tcaaagacca tgaaccagaa gattcaggat gttctcgacc ctaagtttga aaacgtcgaa gtaatctatg ctgccgtcaa gaggaggcag gcaggaatca tcaaggcatt gacgatggag tcggacgaac tctttcgaca atgtgaccca gagacggaca acttgtgctt gtacgggcta ccggatggag gatggaaagt tgcacttcca gcacaagatg ttcctacaga acttccagaa cctgccctag ggataaattt tgccagggac ggaatgtcac gccaagattg gttgactcta attgccctac acagtgatgc ttggctcctc gcgatagcgt ccttttacgg cgctgagctc accagaaacg aaagaaaacg gcttctcgtc atgcttggcg actcacccac gtcctacgat atagtcactg gcaagaacgt cgacgattct cttgactaca gcagagttca tcacatcaag gccatcgacg cttgcagtct tcccatgatc acgggcgggt ccaaggacga aattcgagta aagcaagtga tcacggacga gaatgacaga ggcagaatga tctcgaatca tacgttcttg gcgccaaaag cggtgaccaa ccccgcaact ccacacaaac aatgggagca agtgctgccg gcaattcctc gatctgtcga aaattgtagg aatcaattcg cggagccagc aaaagtagtg tctgaagctc cctgcgtgcc ggagatggct cagtccattc acatgaacgc aactgctgca gtcgatgatt tgtcagtgcc ccaggcagat cccgaggtgc cggaggccag cggctctgca cctcgcgaga gagagaggcc ccctgcccgc ctccggacca agaggcaaac gaagccaaga aacacgttcg ctttggattt cctcgacacc gtggacttct cgtcagacga cgacgacggc gacgaccgtg acggcaccgt ctgcgaaatc tgtcgagccg ggaacgttgg cgacagcgtg acccactggg tggcatgcga ttgctgcgag aagtggttcc actgcaagtg cgtcaaaatc acgccggcca aagcgcagca tctgaagctc tacaagtgcc cgacgtgcgc cagcaagaag gctccctttc agctgttttg aatctgagtc cgggaccaca ccggtcacac cggtcggacc gaatcacgca cggtacggta cagacgagga cgggtgacaa cgcctgctcc gcccgcgcgt acctttctct ttgtcgatgc gacaagcacg tctgcgactg caatcacggt agacgtacag acggagccct ctgtcagaag cggtcgaggc gaacgagaat cgtagattct gaagaaacct cagaatgaag acgcaagctt gtacacgtca gcgcatctga tgccttcctt ggattcttcc cgtgtcgctg cgcttactgc agttggagga caagcgcgcg cttgatcttc gtagaccatg tgtatcgtct tactgcgcaa ggtatcgtag acgtagaaga cgtggggtcg gaatactgta catggacgaa aggcaaggtt gtctcgtttg gtcgtggtcg actttcctga agctaggatg aaacgccggc ggatgctgaa catagtggac gattttattg cacagttcat gttggaatgt gacacgacgt tcgtattatg tctatacgta gttagaaacg tggattgttc ttgagtaacc tacttagtag attcgaacga gatattgacc ggtcc |
CDS |
>Mp1g23460.1 atgaaccaga agattcagga tgttctcgac cctaagtttg aaaacgtcga agtaatctat gctgccgtca agaggaggca ggcaggaatc atcaaggcat tgacgatgga gtcggacgaa ctctttcgac aatgtgaccc agagacggac aacttgtgct tgtacgggct accggatgga ggatggaaag ttgcacttcc agcacaagat gttcctacag aacttccaga acctgcccta gggataaatt ttgccaggga cggaatgtca cgccaagatt ggttgactct aattgcccta cacagtgatg cttggctcct cgcgatagcg tccttttacg gcgctgagct caccagaaac gaaagaaaac ggcttctcgt catgcttggc gactcaccca cgtcctacga tatagtcact ggcaagaacg tcgacgattc tcttgactac agcagagttc atcacatcaa ggccatcgac gcttgcagtc ttcccatgat cacgggcggg tccaaggacg aaattcgagt aaagcaagtg atcacggacg agaatgacag aggcagaatg atctcgaatc atacgttctt ggcgccaaaa gcggtgacca accccgcaac tccacacaaa caatgggagc aagtgctgcc ggcaattcct cgatctgtcg aaaattgtag gaatcaattc gcggagccag caaaagtagt gtctgaagct ccctgcgtgc cggagatggc tcagtccatt cacatgaacg caactgctgc agtcgatgat ttgtcagtgc cccaggcaga tcccgaggtg ccggaggcca gcggctctgc acctcgcgag agagagaggc cccctgcccg cctccggacc aagaggcaaa cgaagccaag aaacacgttc gctttggatt tcctcgacac cgtggacttc tcgtcagacg acgacgacgg cgacgaccgt gacggcaccg tctgcgaaat ctgtcgagcc gggaacgttg gcgacagcgt gacccactgg gtggcatgcg attgctgcga gaagtggttc cactgcaagt gcgtcaaaat cacgccggcc aaagcgcagc atctgaagct ctacaagtgc ccgacgtgcg ccagcaagaa ggctcccttt cagctgtttt ga |
Protein |
>Mp1g23460.1 MNQKIQDVLD PKFENVEVIY AAVKRRQAGI IKALTMESDE LFRQCDPETD NLCLYGLPDG GWKVALPAQD VPTELPEPAL GINFARDGMS RQDWLTLIAL HSDAWLLAIA SFYGAELTRN ERKRLLVMLG DSPTSYDIVT GKNVDDSLDY SRVHHIKAID ACSLPMITGG SKDEIRVKQV ITDENDRGRM ISNHTFLAPK AVTNPATPHK QWEQVLPAIP RSVENCRNQF AEPAKVVSEA PCVPEMAQSI HMNATAAVDD LSVPQADPEV PEASGSAPRE RERPPARLRT KRQTKPRNTF ALDFLDTVDF SSDDDDGDDR DGTVCEICRA GNVGDSVTHW VACDCCEKWF HCKCVKITPA KAQHLKLYKC PTCASKKAPF QLF |