Mp2g10280



Description

Annotation

Database ID Description
PANTHER PTHR31500 AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9
MobiDBLite mobidb-lite consensus disorder prediction
CDD cd11378 DUF296
Pfam PF03479 Plants and Prokaryotes Conserved (PCC) domain
SMART SM00384 AT_hook_2
PANTHER PTHR31500:SF9 AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9
SUPERFAMILY SSF117856 AF0104/ALDC/Ptd012-like
Gene3D G3DSA:3.30.1330.80 Hypothetical protein
PRINTS PR00929 AT-hook-like domain signature
ProSiteProfiles PS51742 PPC domain profile profile.
GO GO:0003680 minor groove of adenine-thymine-rich DNA binding
GO GO:0003677 DNA binding
MapolyID Mapoly0129s0052 -

Nomenclature

Gene symbol Product Transcript ID Status
MpATHOOK2 transcription factor, AThook Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g10280.1 chr2:10528556..10531237 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g10280.2 chr2:10528243..10531237 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g10280.3 chr2:10528243..10531237 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g10280.4 chr2:10528569..10531237 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.